Transcript: ENSDART00000144444.2 slc19a3b-202

Description

solute carrier family 19 member 3b [Source:ZFIN;Acc:ZDB-GENE-050419-166]

Gene Synonyms

si:dkey-223n17.4, slc19a3

Location

About this transcript

This transcript has 5 exons, is annotated with 21 domains and features, is associated with 280 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144444.2	slc19a3b-202	1425	474aa	ENSDARP00000120531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LV16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000086772.5	slc19a3b-201	1629	492aa	ENSDARP00000081206.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R258	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,425 bps, Translation length: 474 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000144444.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.