Transcript: ENSDART00000144419.3 larp4aa-202

Description

La ribonucleoprotein 4Aa [Source:ZFIN;Acc:ZDB-GENE-090313-50]

Gene Synonyms

larp4a, si:ch211-156j22.2

Location

About this transcript

This transcript has 17 exons, is annotated with 24 domains and features, is associated with 518 variant alleles and maps to 97 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144419.3	larp4aa-202	2782	787aa	ENSDARP00000119719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135023.2	larp4aa-201	618	206aa	ENSDARP00000122135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QX31	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,782 bps, Translation length: 787 residues

Version

ENSDART00000144419.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.