Transcript: ENSDART00000144376.3 GMEB1-201

Description

glucocorticoid modulatory element binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-35]

Location

About this transcript

This transcript has 7 exons, is associated with 354 variant alleles and maps to 109 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151169.3	GMEB1-203	4345	584aa	ENSDARP00000125781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QN94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138709.3	GMEB1-202	1987	584aa	ENSDARP00000122476.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QN94	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144376.3	GMEB1-201	760	62aa	ENSDARP00000116054.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 760 bps, Translation length: 62 residues

Version

ENSDART00000144376.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.