Transcript: ENSDART00000144272.2 POU2F1-202

Description

POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]

Location

Chromosome 9: 34,334,156-34,349,651 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 37 domains and features, is associated with 264 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007996.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000146480.3	POU2F1-203	5100	676aa	ENSDARP00000117781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000035522.8	POU2F1-204	5095	676aa	ENSDARP00000037034.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144272.2	POU2F1-202	1881	626aa	ENSDARP00000116250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000147913.3	POU2F1-201	966	284aa	ENSDARP00000113936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000183451.1	POU2F1-205	129	43aa	ENSDARP00000154069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,881 bps, Translation length: 626 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000144272.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144272.2 POU2F1-202

Summary

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Transcript: ENSDART00000144272.2 POU2F1-202

Summary

About Us

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