Transcript: ENSDART00000144229.2 ELAPOR1-202

Description

si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]

Gene Synonyms

im:7136654

Location

Chromosome 8: 23,788,981-23,801,032 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 574 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042899.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189457.1	ELAPOR1-204	3494	982aa	ENSDARP00000148527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q613	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000062968.6	ELAPOR1-203	2883	960aa	ENSDARP00000062967.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBM0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000137820.2	ELAPOR1-201	1862	309aa	ENSDARP00000112528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8Y5S9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000144229.2	ELAPOR1-202	1779	593aa	ENSDARP00000120926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8Y5T0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,779 bps, Translation length: 593 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000144229.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144229.2 ELAPOR1-202

Summary

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Transcript: ENSDART00000144229.2 ELAPOR1-202

Summary

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