Transcript: ENSDART00000144198.2 tenm1-202

Description

teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]

Gene Synonyms

odz1, si:ch211-1c4.1

Location

Chromosome 5: 21,295,747-21,422,390 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 41 domains and features, is associated with 1610 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003403.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000040184.7	tenm1-201	8211	2736aa	ENSDARP00000040183.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RA92	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000176793.2	tenm1-203	8190	2729aa	ENSDARP00000143435.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y8Z9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000144198.2	tenm1-202	7989	2389aa	ENSDARP00000113832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QU90	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 7,989 bps, Translation length: 2,389 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000144198.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144198.2 tenm1-202

Summary

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Transcript: ENSDART00000144198.2 tenm1-202

Summary

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