Transcript: ENSDART00000144126.3 si:ch211-137a8.2-205

Description

si:ch211-137a8.2 [Source:ZFIN;Acc:ZDB-GENE-061103-172]

Gene Synonyms

zgc:152987

Location

Chromosome 15: 29,024,922-29,071,870 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 24 domains and features, is associated with 635 variant alleles and maps to 225 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068926.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144126.3	si:ch211-137a8.2-205	2932	632aa	ENSDARP00000118645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5Y7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131755.2	si:ch211-137a8.2-201	703	199aa	ENSDARP00000112580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE38	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141164.3	si:ch211-137a8.2-204	543	166aa	ENSDARP00000123287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCM4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144546.2	si:ch211-137a8.2-206	1067	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139220.3	si:ch211-137a8.2-203	852	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000133622.2	si:ch211-137a8.2-202	824	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,932 bps, Translation length: 632 residues

Version

ENSDART00000144126.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000144126.3 si:ch211-137a8.2-205

Summary

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Transcript: ENSDART00000144126.3 si:ch211-137a8.2-205

Summary

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