Transcript: ENSDART00000144109.3 slx4ip-203

Description

SLX4 interacting protein [Source:NCBI gene;Acc:393383]

Gene Synonyms

zgc:64090

Location

About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 863 variant alleles and maps to 117 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057052.4	slx4ip-201	2681	499aa	ENSDARP00000057051.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QME8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144109.3	slx4ip-203	2386	490aa	ENSDARP00000120739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKZ7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000140529.2	slx4ip-202	740	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,386 bps, Translation length: 490 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000144109.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.