Transcript: ENSDART00000144096.2 rbm45-202

Description

RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]

Location

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 139 variant alleles and maps to 69 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000181215.1	rbm45-203	1909	467aa	ENSDARP00000145527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S522	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000093415.7	rbm45-201	1865	467aa	ENSDARP00000087847.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S522	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144096.2	rbm45-202	668	192aa	ENSDARP00000114678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 668 bps, Translation length: 192 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000144096.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.