Transcript: ENSDART00000144067.3 cabp5a-201

Description

calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]

Gene Synonyms

zgc:73060

Location

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 292 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144067.3	cabp5a-201	1548	165aa	ENSDARP00000115937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FEW4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192042.1	cabp5a-202	1024	165aa	ENSDARP00000152077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FEW4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,548 bps, Translation length: 165 residues

Version

ENSDART00000144067.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.