Transcript: ENSDART00000144060.2 COA1-201

Description

cytochrome C oxidase assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-070912-694]

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 322 variant alleles and maps to 121 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000187744.1	COA1-203	5392	134aa	ENSDARP00000145438.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S673	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144060.2	COA1-201	887	134aa	ENSDARP00000121413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S673	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145483.2	COA1-202	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 887 bps, Translation length: 134 residues

Version

ENSDART00000144060.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.