Transcript: ENSDART00000144038.2 exo1-204

Description

exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]

Gene Synonyms

fc16e04, wu:fc16e04, zgc:55521

Location

Chromosome 17: 22,570,700-22,571,983 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 210 variant alleles and maps to 55 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000056832.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000079390.6	exo1-201	2735	806aa	ENSDARP00000073846.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188644.1	exo1-205	5010	806aa	ENSDARP00000147578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141523.2	exo1-203	811	108aa	ENSDARP00000117280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140022.3	exo1-202	547	163aa	ENSDARP00000120931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144038.2	exo1-204	608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 608 bps,

Version

ENSDART00000144038.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144038.2 exo1-204

Summary

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Transcript: ENSDART00000144038.2 exo1-204

Summary

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