Transcript: ENSDART00000144009.2 sdr16c5b-202

Description

short chain dehydrogenase/reductase family 16C, member 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2861]

Gene Synonyms

rdhe2, sdr16c5, wu:fj05d06, zgc:63829

Location

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 149 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000049264.7	sdr16c5b-201	1506	306aa	ENSDARP00000049263.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SZ49	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144009.2	sdr16c5b-202	891	240aa	ENSDARP00000112820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDU8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 891 bps, Translation length: 240 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000144009.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.