Transcript: ENSDART00000144000.2 rpz2-202

Description

rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]

Gene Synonyms

fa98e05, wu:fa98e05

Location

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 430 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131072.2	rpz2-201	1140	225aa	ENSDARP00000106769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKP8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144000.2	rpz2-202	881	179aa	ENSDARP00000118934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHP2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147370.2	rpz2-203	526	125aa	ENSDARP00000120792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIS5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 881 bps, Translation length: 179 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000144000.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.