Transcript: ENSDART00000143972.3 rif1-203

Description

replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]

Gene Synonyms

fc38c03, si:dkey-89p3.2, wu:fc38c03

Location

About this transcript

This transcript has 36 exons, is annotated with 57 domains and features, is associated with 579 variant alleles and maps to 307 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143972.3	rif1-203	7574	2392aa	ENSDARP00000117051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UY57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110992.4	rif1-202	7527	2392aa	ENSDARP00000103401.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UY57	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000090816.6	rif1-201	7312	2347aa	ENSDARP00000085249.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 36, Coding exons: 35, Transcript length: 7,574 bps, Translation length: 2,392 residues

Version

ENSDART00000143972.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.