Transcript: ENSDART00000143953.3 strip1-202

Description

striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]

Gene Synonyms

fam40a, wu:fa11b02, zgc:56721

Location

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features and maps to 118 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110048.4	strip1-201	3320	876aa	ENSDARP00000103366.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000189473.1	strip1-203	2812	813aa	ENSDARP00000151879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QFW5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143953.3	strip1-202	1375	448aa	ENSDARP00000115347.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,375 bps, Translation length: 448 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143953.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.