Transcript: ENSDART00000143943.2 nxt2-201

Description

nuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]

Gene Synonyms

zgc:153074

Location

Chromosome 14: 28,459,468-28,463,875 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 208 variant alleles and maps to 96 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061527.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173007.2	nxt2-204	851	137aa	ENSDARP00000142206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LG28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146344.2	nxt2-203	752	143aa	ENSDARP00000123239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCN6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144076.3	nxt2-202	731	143aa	ENSDARP00000114020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCN6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143943.2	nxt2-201	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 728 bps,

Version

ENSDART00000143943.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143943.2 nxt2-201

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Transcript: ENSDART00000143943.2 nxt2-201

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