Transcript: ENSDART00000143938.2 sema3ga-203

Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]

Location

Chromosome 8: 25,650,326-25,697,279 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 26 domains and features, is associated with 8 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042545.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000033701.6	sema3ga-201	2361	749aa	ENSDARP00000038865.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L5C9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184404.1	sema3ga-204	3246	749aa	ENSDARP00000146722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L5C9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143938.2	sema3ga-203	2413	749aa	ENSDARP00000119336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L5C9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137914.2	sema3ga-202	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 2,413 bps, Translation length: 749 residues

Version

ENSDART00000143938.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143938.2 sema3ga-203

Summary

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Transcript: ENSDART00000143938.2 sema3ga-203

Summary

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