Transcript: ENSDART00000143935.3 rarga-203

Description

retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]

Gene Synonyms

NR1B3-A, RARgamma-A, etID309710.23, etID33387.23, nr1b3a, rarg, rarg2, wu:fb01e02, wu:fb01f03, wu:fc35a09, zRAR-gamma, zRAR-gamma-2, zrarg

Location

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 1299 variant alleles and maps to 105 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000049551.6	rarga-201	2053	499aa	ENSDARP00000049550.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q91392	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143935.3	rarga-203	686	153aa	ENSDARP00000123094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000129222.4	rarga-202	666	153aa	ENSDARP00000112380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 686 bps, Translation length: 153 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143935.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.