Transcript: ENSDART00000143934.3 rps24-205

Description

ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]

Gene Synonyms

wu:fa66b02, zgc:103596, zgc:109740

Location

Chromosome 13: 30,228,101-30,233,680 forward strand.

About this transcript

This transcript has 4 exons, is associated with 232 variant alleles and maps to 442 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000039347.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000100813.6	rps24-201	551	132aa	ENSDARP00000091586.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZD34	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000147729.3	rps24-206	1343	131aa	ENSDARP00000115960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q642J7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000141945.3	rps24-204	820	119aa	ENSDARP00000121784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000133404.2	rps24-202	715	119aa	ENSDARP00000113267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134691.2	rps24-203	1481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000143934.3	rps24-205	840	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 840 bps,

Version

ENSDART00000143934.3

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000143934.3 rps24-205

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Transcript: ENSDART00000143934.3 rps24-205

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