Transcript: ENSDART00000143871.2 ctnna2-205

Description

catenin (cadherin-associated protein), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060815-3]

Gene Synonyms

im:5410539, si:rp71-1h10.1

Location

Chromosome 1: 42,345,532-42,391,220 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 16 variant alleles and maps to 37 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000024785.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101306.6	ctnna2-201	3382	865aa	ENSDARP00000092080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZC77	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153506.3	ctnna2-207	7103	521aa	ENSDARP00000129168.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184778.1	ctnna2-209	6141	367aa	ENSDARP00000156262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000177496.2	ctnna2-208	4684	380aa	ENSDARP00000143454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000110860.4	ctnna2-202	1683	373aa	ENSDARP00000098352.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000138740.3	ctnna2-204	1560	430aa	ENSDARP00000123176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143871.2	ctnna2-205	899	271aa	ENSDARP00000118591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148371.2	ctnna2-206	822	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137609.4	ctnna2-203	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 899 bps, Translation length: 271 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143871.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000143871.2 ctnna2-205

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Transcript: ENSDART00000143871.2 ctnna2-205

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