Transcript: ENSDART00000143869.3 si:dkey-237j10.2-203

Description

si:dkey-237j10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-206]

Location

Chromosome 5: 22,961,256-22,969,424 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 367 variant alleles and maps to 55 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094025.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172549.2	si:dkey-237j10.2-205	5145	363aa	ENSDARP00000133198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4II88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135711.3	si:dkey-237j10.2-202	823	241aa	ENSDARP00000135463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIU0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143869.3	si:dkey-237j10.2-203	801	157aa	ENSDARP00000137159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILZ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134328.3	si:dkey-237j10.2-201	868	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000146753.2	si:dkey-237j10.2-204	926	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 801 bps, Translation length: 157 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143869.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143869.3 si:dkey-237j10.2-203

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Transcript: ENSDART00000143869.3 si:dkey-237j10.2-203

Summary

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