Transcript: ENSDART00000143859.2 MMS22L-201

Description

MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]

Location

Chromosome 16: 32,303,643-32,304,764 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 195 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000074691.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000191408.1	MMS22L-204	4088	1240aa	ENSDARP00000155250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q905	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134381.2	MMS22L-203	3931	1240aa	ENSDARP00000115566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q905	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143859.2	MMS22L-201	420	52aa	ENSDARP00000115623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136517.2	MMS22L-202	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 420 bps, Translation length: 52 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143859.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143859.2 MMS22L-201

Summary

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Transcript: ENSDART00000143859.2 MMS22L-201

Summary

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