Transcript: ENSDART00000143848.3 sub1a-202

Description

SUB1 regulator of transcription a [Source:ZFIN;Acc:ZDB-GENE-050522-151]

Gene Synonyms

zgc:109973

Location

Chromosome 10: 8,091,144-8,098,092 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 335 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000053446.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143848.3	sub1a-202	734	123aa	ENSDARP00000118111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q504B1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000075485.4	sub1a-201	714	123aa	ENSDARP00000069967.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q504B1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189915.1	sub1a-203	381	123aa	ENSDARP00000149014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q504B1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 734 bps, Translation length: 123 residues

Version

ENSDART00000143848.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000143848.3 sub1a-202

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Transcript: ENSDART00000143848.3 sub1a-202

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