Transcript: ENSDART00000143814.3 srsf6b-203

Description

serine and arginine rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]

Gene Synonyms

sfrs6, sfrs6b, wu:faa54g02, wu:fc17h09, zgc:103497

Location

About this transcript

This transcript has 7 exons, is associated with 244 variant alleles and maps to 107 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000002318.8	srsf6b-201	2496	355aa	ENSDARP00000022089.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143814.3	srsf6b-203	1084	95aa	ENSDARP00000139854.1	Nonsense mediated decay	-
ENSDART00000139079.2	srsf6b-202	808	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000147311.2	srsf6b-204	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,084 bps, Translation length: 95 residues

Version

ENSDART00000143814.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.