Transcript: ENSDART00000143789.2 si:ch73-337l15.1-202

Description

si:ch73-337l15.1 [Source:ZFIN;Acc:ZDB-GENE-081104-281]

Location

About this transcript

This transcript has 6 exons, is annotated with 26 domains and features, is associated with 763 variant alleles and maps to 67 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113502.4	si:ch73-337l15.1-201	6025	802aa	ENSDARP00000098046.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFD4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187143.1	si:ch73-337l15.1-204	5835	799aa	ENSDARP00000151527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190626.1	si:ch73-337l15.1-205	1404	467aa	ENSDARP00000157672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000182634.1	si:ch73-337l15.1-203	1401	466aa	ENSDARP00000148060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000143789.2	si:ch73-337l15.1-202	1230	348aa	ENSDARP00000116192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,230 bps, Translation length: 348 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000143789.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.