Transcript: ENSDART00000143773.3 plxnb2a.1-202

Description

plexin b2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8917]

Location

Chromosome 4: 14,449,233-14,470,071 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 23 domains and features, is associated with 453 variant alleles and maps to 237 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003811.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159447.2	plxnb2a.1-203	5805	1864aa	ENSDARP00000130290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000048821.7	plxnb2a.1-201	5760	1864aa	ENSDARP00000048820.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBC0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182093.1	plxnb2a.1-204	5676	1821aa	ENSDARP00000145608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000143773.3	plxnb2a.1-202	4473	917aa	ENSDARP00000122721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 4,473 bps, Translation length: 917 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000143773.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143773.3 plxnb2a.1-202

Summary

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Transcript: ENSDART00000143773.3 plxnb2a.1-202

Summary

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