Transcript: ENSDART00000143766.3 tbc1d4-201

Description

TBC1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9881]

Gene Synonyms

cb53, sb:cb53, si:ch211-222g23.4

Location

Chromosome 9: 30,585,600-30,639,362 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 41 domains and features, is associated with 1336 variant alleles and maps to 123 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000075156.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000143766.3	tbc1d4-201	4019	1230aa	ENSDARP00000114595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000160590.2	tbc1d4-203	3186	1061aa	ENSDARP00000132470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189815.1	tbc1d4-204	3081	1026aa	ENSDARP00000151394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000191310.1	tbc1d4-205	877	207aa	ENSDARP00000156949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000147813.2	tbc1d4-202	756	202aa	ENSDARP00000114090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,019 bps, Translation length: 1,230 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000143766.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000143766.3 tbc1d4-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000143766.3 tbc1d4-201

Summary

About Us

Get help

Our sister sites

Follow us