Transcript: ENSDART00000143677.3 GRM6-203

Description

glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]

Gene Synonyms

cb496, grma, zK13A21.16, zgc:158329

Location

Chromosome 11: 25,638,228-25,675,690 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 64 domains and features, is associated with 605 variant alleles and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000025671.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000033657.7	GRM6-201	3834	909aa	ENSDARP00000030907.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000114226.5	GRM6-202	4186	909aa	ENSDARP00000101460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000143677.3	GRM6-203	2733	905aa	ENSDARP00000118692.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1T5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,733 bps, Translation length: 905 residues

Version

ENSDART00000143677.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000143677.3 GRM6-203

Summary

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Transcript: ENSDART00000143677.3 GRM6-203

Summary

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