Transcript: ENSDART00000143671.3 NAXD-208

Description

NAD(P)HX dehydratase [Source:ZFIN;Acc:ZDB-GENE-080204-1]

Location

Chromosome 9: 8,898,044-8,904,059 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 361 variant alleles and maps to 79 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077119.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130208.3	NAXD-209	3053	625aa	ENSDARP00000107908.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F490	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147098.3	NAXD-203	1753	330aa	ENSDARP00000123516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q575	-
ENSDART00000111214.4	NAXD-211	1573	424aa	ENSDARP00000102965.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000179969.1	NAXD-210	1431	476aa	ENSDARP00000148059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134954.3	NAXD-207	1060	244aa	ENSDARP00000121824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147820.2	NAXD-202	1030	287aa	ENSDARP00000113847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140232.3	NAXD-204	910	304aa	ENSDARP00000117631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000143671.3	NAXD-208	876	232aa	ENSDARP00000116518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132443.2	NAXD-201	796	265aa	ENSDARP00000112953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000132068.2	NAXD-206	698	116aa	ENSDARP00000117562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139687.3	NAXD-205	677	226aa	ENSDARP00000122582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 876 bps, Translation length: 232 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143671.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143671.3 NAXD-208

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000143671.3 NAXD-208

Summary

About Us

Get help

Our sister sites

Follow us