Transcript: ENSDART00000143663.2 ptprdb-203

Description

protein tyrosine phosphatase receptor type Db [Source:ZFIN;Acc:ZDB-GENE-070615-38]

Location

Chromosome 1: 19,205,560-19,237,576 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 22 domains and features, is associated with 586 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000019945.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127145.4	ptprdb-201	1140	205aa	ENSDARP00000110458.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PLI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000131579.3	ptprdb-202	6806	1934aa	ENSDARP00000122737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5J5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162949.2	ptprdb-204	5805	1934aa	ENSDARP00000134692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5J5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170680.2	ptprdb-205	4548	1515aa	ENSDARP00000140523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXV2	-
ENSDART00000143663.2	ptprdb-203	957	205aa	ENSDARP00000115871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PLI0	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 957 bps, Translation length: 205 residues

Version

ENSDART00000143663.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143663.2 ptprdb-203

Summary

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Transcript: ENSDART00000143663.2 ptprdb-203

Summary

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