Transcript: ENSDART00000143639.3 vps8-203

Description

VPS8 subunit of CORVET complex [Source:ZFIN;Acc:ZDB-GENE-060503-348]

Gene Synonyms

im:7166005, si:dkey-24b15.1, zgc:158695

Location

About this transcript

This transcript has 45 exons, is annotated with 22 domains and features, is associated with 2380 variant alleles and maps to 250 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143639.3	vps8-203	4399	1412aa	ENSDARP00000117166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQ05	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000101779.6	vps8-201	1528	455aa	ENSDARP00000092555.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000146783.2	vps8-204	830	235aa	ENSDARP00000113658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134311.3	vps8-202	687	146aa	ENSDARP00000120853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 45, Coding exons: 45, Transcript length: 4,399 bps, Translation length: 1,412 residues

Version

ENSDART00000143639.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.