Transcript: ENSDART00000143638.2 RACGAP1-201

Description

Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]

Location

About this transcript

This transcript has 5 exons and maps to 96 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027959.10	RACGAP1-203	2719	654aa	ENSDARP00000020703.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P3H8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000160116.2	RACGAP1-204	5972	639aa	ENSDARP00000141431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IZK0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132147.2	RACGAP1-202	1389	439aa	ENSDARP00000116910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143638.2	RACGAP1-201	845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 845 bps,

Version

ENSDART00000143638.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.