Transcript: ENSDART00000143588.3 si:dkeyp-26a9.7-202

Description

si:dkeyp-26a9.7 [Source:ZFIN;Acc:ZDB-GENE-100922-50]

Location

Chromosome 1: 23,596,731-23,598,674 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 114 variant alleles and maps to 72 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094046.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000142641.3	si:dkeyp-26a9.7-201	313	88aa	ENSDARP00000139022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143588.3	si:dkeyp-26a9.7-202	913	56aa	ENSDARP00000133126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000144348.3	si:dkeyp-26a9.7-203	408	54aa	ENSDARP00000131083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 913 bps, Translation length: 56 residues

Version

ENSDART00000143588.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000143588.3 si:dkeyp-26a9.7-202

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Transcript: ENSDART00000143588.3 si:dkeyp-26a9.7-202

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