Transcript: ENSDART00000143581.3 spock2-203

Description

SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]

Location

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 244 variant alleles and maps to 69 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186045.1	spock2-204	2282	419aa	ENSDARP00000150729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q8S3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132027.2	spock2-202	1704	364aa	ENSDARP00000122158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000110061.4	spock2-201	1338	373aa	ENSDARP00000100863.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000143581.3	spock2-203	276	78aa	ENSDARP00000118081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 276 bps, Translation length: 78 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143581.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.