Transcript: ENSDART00000143525.3 aspg-204

Description

asparaginase homolog (S. cerevisiae) [Source:NCBI gene (formerly Entrezgene);Acc:100124594]

Location

Chromosome 17: 45,738,095-45,751,405 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 23 domains and features, is associated with 702 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000052942.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135073.3	aspg-202	2736	648aa	ENSDARP00000119797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000158165.2	aspg-206	3099	665aa	ENSDARP00000140053.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IU93	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000184167.1	aspg-207	3084	660aa	ENSDARP00000156497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PE15	-
ENSDART00000109525.4	aspg-201	3075	657aa	ENSDARP00000103166.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000145882.2	aspg-205	913	74aa	ENSDARP00000117682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000143525.3	aspg-204	872	289aa	ENSDARP00000117209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136277.2	aspg-203	331	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 872 bps, Translation length: 289 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143525.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143525.3 aspg-204

Summary

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Transcript: ENSDART00000143525.3 aspg-204

Summary

About Us

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