Transcript: ENSDART00000143518.2 g3bp1-204

Description

GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]

Gene Synonyms

fj17h05, wu:fj17h05, zgc:56034

Location

Chromosome 14: 25,926,108-25,928,899 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 18 domains and features, is associated with 13 variant alleles and maps to 107 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000017741.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139855.3	g3bp1-202	4342	477aa	ENSDARP00000121211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P124	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000018651.8	g3bp1-201	1447	354aa	ENSDARP00000003185.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJB8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000143518.2	g3bp1-204	887	283aa	ENSDARP00000113956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QX72	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145850.3	g3bp1-205	713	186aa	ENSDARP00000123429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGX3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000147991.2	g3bp1-206	472	157aa	ENSDARP00000114713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFP9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000142340.2	g3bp1-203	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 887 bps, Translation length: 283 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000143518.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143518.2 g3bp1-204

Summary

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Transcript: ENSDART00000143518.2 g3bp1-204

Summary

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