Transcript: ENSDART00000143504.3 PEX5L-201

Description

peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]

Location

About this transcript

This transcript has 3 exons, is associated with 401 variant alleles and maps to 26 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000104293.6	PEX5L-202	3108	602aa	ENSDARP00000095068.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180262.1	PEX5L-203	1506	501aa	ENSDARP00000154036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000164296.2	PEX5L-205	1485	494aa	ENSDARP00000141661.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000180066.1	PEX5L-206	1377	458aa	ENSDARP00000148486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000180205.1	PEX5L-204	1206	401aa	ENSDARP00000146988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000143504.3	PEX5L-201	721	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 721 bps,

Version

ENSDART00000143504.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.