Transcript: ENSDART00000143484.2 cnga4-202

Description

cyclic nucleotide gated channel subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070912-292]

Gene Synonyms

si:ch211-39h10.2

Location

About this transcript

This transcript has 5 exons, is annotated with 27 domains and features, is associated with 215 variant alleles and maps to 138 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000100928.5	cnga4-201	1854	617aa	ENSDARP00000091701.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5G4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143484.2	cnga4-202	1953	579aa	ENSDARP00000117025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQP5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,953 bps, Translation length: 579 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000143484.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.