Transcript: ENSDART00000143479.2 rubcnl-202

Description

rubicon like autophagy enhancer [Source:ZFIN;Acc:ZDB-GENE-070912-256]

Gene Synonyms

si:ch211-260b17.6

Location

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 267 variant alleles and maps to 102 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143479.2	rubcnl-202	849	282aa	ENSDARP00000113588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAA9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132160.2	rubcnl-201	746	249aa	ENSDARP00000123329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIG8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 849 bps, Translation length: 282 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000143479.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.