Transcript: ENSDART00000143451.2 CNIH2-201

Description

cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]

Location

About this transcript

This transcript has 8 exons, is annotated with 22 domains and features, is associated with 113 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143451.2	CNIH2-201	1955	160aa	ENSDARP00000115028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QGM1 Q5BL21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000041841.5	CNIH2-202	1457	160aa	ENSDARP00000041840.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QGM1 Q5BL21	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,955 bps, Translation length: 160 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5BL21

Version

ENSDART00000143451.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.