Transcript: ENSDART00000143449.3 zgc:172253-201

Description

zgc:172253 [Source:ZFIN;Acc:ZDB-GENE-080215-9]

Location

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 251 variant alleles and maps to 54 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143449.3	zgc:172253-201	1940	564aa	ENSDARP00000121967.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5R5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171753.2	zgc:172253-202	1902	564aa	ENSDARP00000131025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5R5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,940 bps, Translation length: 564 residues

Version

ENSDART00000143449.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.