Transcript: ENSDART00000143424.3 fbxo44.5-202

Description

F-box protein 44, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-040801-53]

Location

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 104 variant alleles and maps to 284 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143424.3	fbxo44.5-202	1960	247aa	ENSDARP00000118903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8M7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161299.2	fbxo44.5-203	3084	247aa	ENSDARP00000130776.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8M7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142789.3	fbxo44.5-201	722	161aa	ENSDARP00000120478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,960 bps, Translation length: 247 residues

Version

ENSDART00000143424.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.