Transcript: ENSDART00000143417.4 zgc:171727-201

Description

zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]

Location

About this transcript

This transcript has 3 exons, is annotated with 81 domains and features, is associated with 590 variant alleles and maps to 83 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143417.4	zgc:171727-201	1953	471aa	ENSDARP00000121622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGR9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171434.2	zgc:171727-202	1603	443aa	ENSDARP00000134686.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000174205.2	zgc:171727-203	343	44aa	ENSDARP00000143136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,953 bps, Translation length: 471 residues

Version

ENSDART00000143417.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.