Transcript: ENSDART00000143410.3 emb-203

Description

embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]

Gene Synonyms

si:ch211-261c8.5

Location

Chromosome 5: 66,353,750-66,362,023 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 13 domains and features, is associated with 406 variant alleles and maps to 253 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000059485.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143410.3	emb-203	1870	325aa	ENSDARP00000117091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R9YJN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000082745.6	emb-201	969	300aa	ENSDARP00000077180.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKA0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000138246.3	emb-202	706	199aa	ENSDARP00000115177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHC0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,870 bps, Translation length: 325 residues

Version

ENSDART00000143410.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143410.3 emb-203

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Transcript: ENSDART00000143410.3 emb-203

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