Transcript: ENSDART00000143404.2 si:ch211-260p9.3-203

Description

si:ch211-260p9.3 [Source:ZFIN;Acc:ZDB-GENE-050419-185]

Location

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 34 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137506.2	si:ch211-260p9.3-202	1426	476aa	ENSDARP00000123439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGV9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000131555.2	si:ch211-260p9.3-201	812	271aa	ENSDARP00000122909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWP3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000143404.2	si:ch211-260p9.3-203	810	270aa	ENSDARP00000117526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWW2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 810 bps, Translation length: 270 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000143404.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.