Transcript: ENSDART00000143401.3 becn1-202

Description

beclin 1, autophagy related [Source:ZFIN;Acc:ZDB-GENE-040426-1666]

Gene Synonyms

zgc:73097

Location

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 238 variant alleles and maps to 220 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000115237.5	becn1-201	1929	447aa	ENSDARP00000100986.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143401.3	becn1-202	1547	333aa	ENSDARP00000115678.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,547 bps, Translation length: 333 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000143401.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.