Transcript: ENSDART00000143359.4 sec23b-204

Description

SEC23 homolog B, coat complex II component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]

Gene Synonyms

fl08h02, wu:fd19h01, wu:fl08h02, zgc:55595, zgc:86871

Location

Chromosome 6: 6,779,114-6,795,996 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 18 domains and features, is associated with 608 variant alleles and maps to 294 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000019360.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000011865.8	sec23b-201	3698	766aa	ENSDARP00000017982.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163493.2	sec23b-206	3133	766aa	ENSDARP00000137093.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143359.4	sec23b-204	3105	754aa	ENSDARP00000119917.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000132371.2	sec23b-202	777	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000135105.2	sec23b-203	464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000146293.2	sec23b-205	365	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,105 bps, Translation length: 754 residues

Version

ENSDART00000143359.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000143359.4 sec23b-204

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Transcript: ENSDART00000143359.4 sec23b-204

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