Transcript: ENSDART00000143341.3 FXR2-202

Description

FMR1 autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]

Gene Synonyms

id:ibd5046, zgc:56215, zgc:77472

Location

About this transcript

This transcript has 15 exons, is annotated with 36 domains and features, is associated with 285 variant alleles and maps to 241 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000027718.9	FXR2-201	4106	676aa	ENSDARP00000004667.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143341.3	FXR2-202	2521	583aa	ENSDARP00000113332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000173609.2	FXR2-203	729	160aa	ENSDARP00000142685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,521 bps, Translation length: 583 residues

Version

ENSDART00000143341.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.