Transcript: ENSDART00000143331.2 si:dkey-258f14.3-203

Description

si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]

Gene Synonyms

im:7153933

Location

About this transcript

This transcript has 2 exons, is annotated with 25 domains and features and maps to 31 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134153.3	si:dkey-258f14.3-201	1464	488aa	ENSDARP00000116770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0P4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000143331.2	si:dkey-258f14.3-203	981	168aa	ENSDARP00000117727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZH7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000138685.2	si:dkey-258f14.3-202	949	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 981 bps, Translation length: 168 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000143331.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.